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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27936094_27937545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27936094 - 27937545

Intron Length:

1452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

GTGTTAGTAACA

Flanking Amino Acid:

AKANAELYSEVKYKEGWEKS

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

88.7

0.87

0.6

21.8

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

48.3

-0.1

2.2

64.69

41.7

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595