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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27937651_27938150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27937651 - 27938150

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CAATTTATGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATTTTTTCAATT

Flanking Amino Acid:

AKINAQQLSDLNYRAQYEKT

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

66.4

0.37

1.1

61.8

42.9

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

66.9

0.61

1.4

81.89

33.7

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595