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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27942159_27943895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27942159 - 27943895

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

AACATGTTAACT

Flanking Amino Acid:

AQSANKLVSEVEYKKGLGNN

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

0.36

1.1

64.9

40.7

Minor 5ss

-1.8

3.3

48.8

Minor BPS

49.9

0.07

2.1

67.75

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014153

27906555 - 27951149

44595

ENSAPLT00000047647

27904606 - 27951149

46544