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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27945152_27947492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27945152 - 27947492

Intron Length:

2341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATC

5'SS Class:

strong_major

3'SS Sequence:

GAATTTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

ACACCTTGAATT

Flanking Amino Acid:

ARENVDQYSQDYMDEYEERR

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.9

36.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

77.3

0.61

0.9

Minor 5ss

50.2

0.01

2.5

68.8

42.2

Minor BPS

54.7

0.23

1.4

65.57

39.1

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595