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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27947598_27948659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27947598 - 27948659

Intron Length:

1062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTCTTTTCATT

Flanking Amino Acid:

AKRANELASDVKYHQQYENE

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

81.7

Major BPS

100

1.24

0.5

100

Major PPT

0.83

0.7

85.9

27.9

Minor 5ss

39.7

-1.2

3.4

57.1

40.8

Minor BPS

55.1

0.24

1.7

74.8

36.5

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047647

27904606 - 27951149

46544

ENSAPLT00000014153

27906555 - 27951149

44595