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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27948768_27949386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27948768 - 27949386

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GTTCTTTTTACA

Flanking Amino Acid:

AKVAGQLSSDLKYTEDFEER

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

88.8

0.87

0.7

83.5

31.6

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

57.6

0.23

1.6

68.96

36.8

Associated Gene:

Gene:

NRAP

Ensembl Gene ID:

ENSAPLG00000013492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014153

27906555 - 27951149

44595

ENSAPLT00000047647

27904606 - 27951149

46544