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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27963500_27980221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27963500 - 27980221

Intron Length:

16722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCACATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TGGCCACTAACA

Flanking Amino Acid:

DRSSRLSIFSRKKKNGEEEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

82.3

32.2

Major BPS

64.5

0.36

65.2

28.2

Major PPT

66.8

0.38

0.9

62.2

Minor 5ss

40.5

-1.1

2.8

44.2

Minor BPS

49.2

-0

64.22

41.2

Associated Gene:

Gene:

CASP7

Ensembl Gene ID:

ENSAPLG00000013412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013972

27962581 - 27983845

21265