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Intron Name: Anas_platyrhynchos_platyrhynchos_6_27982045_27982140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27982045 - 27982140

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGCT

5'SS Class:

strong_major

3'SS Sequence:

ACTGCTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCATCTTCACT

Flanking Amino Acid:

IGKPKLFFIQACRGSEFDEG

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

74.4

33.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

74.7

0.56

0.9

70.4

39.4

Minor 5ss

33.1

-1.9

3.4

48.8

46.8

Minor BPS

56.3

0.28

1.8

72.79

44.1

Associated Gene:

Gene:

CASP7

Ensembl Gene ID:

ENSAPLG00000013412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013972

27962581 - 27983845

21265