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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28021447_28023029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28021447 - 28023029

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTAATCCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTTTCCCAATT

Flanking Amino Acid:

YSIGKEKVFLAIAEVLGSKA

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

0.82

0.8

24.9

Major PPT

0.29

1.1

61.1

39.6

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

61.1

0.43

1.9

84.67

35.9

Associated Gene:

Gene:

DCLRE1A

Ensembl Gene ID:

ENSAPLG00000013365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023979

28019980 - 28033086

13107

ENSAPLT00000013927

28016209 - 28033086

16878