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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28023176_28024099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28023176 - 28024099

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

TTCCATGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTGTAATGAATT

Flanking Amino Acid:

QKVHTLYLDTTYCSPEYTFP

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.3

64.1

43.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

70.1

0.45

0.9

61.3

39.8

Minor 5ss

45.6

-0.5

2.8

58.2

40.2

Minor BPS

48.5

-0

1.9

68.27

42.1

Associated Gene:

Gene:

DCLRE1A

Ensembl Gene ID:

ENSAPLG00000013365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013927

28016209 - 28033086

16878

ENSAPLT00000023979

28019980 - 28033086

13107