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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28024244_28025957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28024244 - 28025957

Intron Length:

1714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATGTATC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTTCCTTTCCA

Flanking Amino Acid:

GIKVVLLDANHCPGATMILF

Intron Amino Acid Position:

751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

37.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

48.6

-0.1

2.4

68.5

35.9

Minor BPS

49.3

-0

3.6

83.52

Associated Gene:

Gene:

DCLRE1A

Ensembl Gene ID:

ENSAPLG00000013365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023979

28019980 - 28033086

13107

ENSAPLT00000013927

28016209 - 28033086

16878