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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28026077_28026891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28026077 - 28026891

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TATTCCATATTA

Flanking Amino Acid:

NFMFPIYCNKITGNLVKSKL

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

88.4

0.86

0.8

83.5

31.6

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

59.1

0.28

1.9

73.73

37.9

Associated Gene:

Gene:

DCLRE1A

Ensembl Gene ID:

ENSAPLG00000013365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013927

28016209 - 28033086

16878

ENSAPLT00000023979

28019980 - 28033086

13107