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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28030550_28032004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28030550 - 28032004

Intron Length:

1455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTCTCTTTAAAC

Flanking Amino Acid:

CLDTPGSTEKECPDGLLCTS

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.2

35.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

73.8

0.54

0.9

68.6

36.7

Minor 5ss

32.6

-2

3.7

46.4

48.9

Minor BPS

75.3

0.77

1.3

79.33

Associated Gene:

Gene:

DCLRE1A

Ensembl Gene ID:

ENSAPLG00000013365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023979

28019980 - 28033086

13107

ENSAPLT00000013927

28016209 - 28033086

16878