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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28056839_28057302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28056839 - 28057302

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATCACT

5'SS Class:

major

3'SS Sequence:

TATTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTTAATA

Flanking Amino Acid:

HLVGGERDPLNLFAFGDVDG

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

69.9

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.7

0.8

77.4

41.1

Minor 5ss

42.2

-0.9

2.9

56.2

42.1

Minor BPS

67.4

0.54

1.5

33.7

Associated Gene:

Gene:

NHLRC2

Ensembl Gene ID:

ENSAPLG00000013273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013839

28033107 - 28063091

29985