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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28098405_28102867_F

Intron Information:

Intron Rank:

142488

Intron Class:

major

Intron Phase:

Intron Coordinates:

28098405 - 28102867

Intron Length:

4463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAG

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TGTGCATTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

73.4

37.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

79.7

0.67

0.8

74.5

35.4

Minor 5ss

38.9

-1.2

2.8

47.7

Minor BPS

67.1

0.52

1.7

76.59

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041854

28097535 - 28103647

6113