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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28102926_28111895_F

Intron Information:

Intron Rank:

142487

Intron Class:

major

Intron Phase:

Intron Coordinates:

28102926 - 28111895

Intron Length:

8970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCAAGCTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.3

30.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

77.3

0.61

0.8

73.2

30.5

Minor 5ss

33.6

-1.9

2.8

31.7

42.6

Minor BPS

60.2

0.3

1.9

67.93

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038256

28102198 - 28112403

10206