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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28160401_28161130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28160401 - 28161130

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TCTAACTTAACC

Flanking Amino Acid:

DTLLKNITLKENLQTLGTEI

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.7

33.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

70.3

0.46

71.1

27.5

Minor 5ss

35.6

-1.6

2.8

42.7

38.3

Minor BPS

69.9

0.61

1.5

76.35

39.5

Associated Gene:

Gene:

CCDC186

Ensembl Gene ID:

ENSAPLG00000013137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045637

28160271 - 28182098

21828

ENSAPLT00000013706

28160317 - 28181240

20924