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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28164799_28165399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28164799 - 28165399

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ACTATAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CAAACTATAATT

Flanking Amino Acid:

ECVRQAKDDVATKLQKEEDQ

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

75.5

0.63

1.1

34.4

Major PPT

72.3

0.5

67.5

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

49.7

0.06

1.6

63.68

40.6

Associated Gene:

Gene:

CCDC186

Ensembl Gene ID:

ENSAPLG00000013137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045637

28160271 - 28182098

21828

ENSAPLT00000013706

28160317 - 28181240

20924