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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28169516_28169870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28169516 - 28169870

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

TCTATCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AAAACTAAAACT

Flanking Amino Acid:

NCQEMIKTYQESEEIKSNEL

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

80.1

0.68

0.8

77.8

30.9

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

46.1

-0.2

1.9

62.43

Associated Gene:

Gene:

CCDC186

Ensembl Gene ID:

ENSAPLG00000013137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045637

28160271 - 28182098

21828

ENSAPLT00000013706

28160317 - 28181240

20924