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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28170617_28171872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28170617 - 28171872

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTCTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ATATCCATAAAA

Flanking Amino Acid:

GRLHQLYETKDAEATRLNKE

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.1

40.7

Major BPS

84.6

0.86

41.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.8

-1.5

3.2

47.8

47.7

Minor BPS

62.9

0.4

1.7

73.71

36.9

Associated Gene:

Gene:

CCDC186

Ensembl Gene ID:

ENSAPLG00000013137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045637

28160271 - 28182098

21828

ENSAPLT00000013706

28160317 - 28181240

20924