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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28175108_28177461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28175108 - 28177461

Intron Length:

2354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

KYLEQEQTIKKLIKENKKHQ

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

89.7

22.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

37.9

-1.4

51.7

39.1

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

CCDC186

Ensembl Gene ID:

ENSAPLG00000013137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045637

28160271 - 28182098

21828

ENSAPLT00000013706

28160317 - 28181240

20924