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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28197322_28197656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28197322 - 28197656

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTAA

5'SS Class:

major

3'SS Sequence:

GTTCTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTGTTCTTACAT

Flanking Amino Acid:

LGLKKAMEVQGTVTEFRSPS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.2

33.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.2

0.77

0.8

81.4

30.7

Minor 5ss

38.5

-1.3

49.6

46.6

Minor BPS

57.4

0.31

1.8

73.4

43.4

Associated Gene:

Gene:

TDRD1

Ensembl Gene ID:

ENSAPLG00000012609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013130

28192249 - 28212469

20221