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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28198658_28199596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28198658 - 28199596

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

TAATTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATG

Flanking Amino Acid:

CKDIELLPPCAIKCSFANYE

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

70.5

36.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.2

0.72

0.9

73.8

41.1

Minor 5ss

39.4

-1.2

2.9

51.5

44.9

Minor BPS

60.4

0.19

1.5

61.64

41.7

Associated Gene:

Gene:

TDRD1

Ensembl Gene ID:

ENSAPLG00000012609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013130

28192249 - 28212469

20221