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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28199769_28200935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28199769 - 28200935

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCATCTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GTATGCTAAACT

Flanking Amino Acid:

FAVDVVRPNFYKLPLEMGSD

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

67.8

0.4

65.7

40.9

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

57.1

0.3

2.1

77.58

44.5

Associated Gene:

Gene:

TDRD1

Ensembl Gene ID:

ENSAPLG00000012609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013130

28192249 - 28212469

20221