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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28236769_28237300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28236769 - 28237300

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCTG

5'SS Class:

major

3'SS Sequence:

CCTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAGCAC

U12 Branch Point Sequence:

CGGTACCGAGCT

Flanking Amino Acid:

ELKEMLVGCTDKSLEQKLKE

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

57.6

46.8

Major BPS

43.4

-0.4

1.3

47.1

36.1

Major PPT

81.9

0.72

0.7

75.9

Minor 5ss

32.3

-2

3.7

46.2

49.1

Minor BPS

40.5

-0.6

55.72

45.5

Associated Gene:

Gene:

AFAP1L2

Ensembl Gene ID:

ENSAPLG00000012051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012585

28234325 - 28247219

12895