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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28242340_28242643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28242340 - 28242643

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACCTT

5'SS Class:

major

3'SS Sequence:

TGCTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GTCTGCATAGCT

Flanking Amino Acid:

PDSQRLTYPKVELSERYSAA

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

66.2

45.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

72.2

0.5

1.1

68.5

42.1

Minor 5ss

42.1

-0.9

3.5

46.3

Minor BPS

46.9

-0.1

2.2

69.67

46.7

Associated Gene:

Gene:

AFAP1L2

Ensembl Gene ID:

ENSAPLG00000012051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012585

28234325 - 28247219

12895