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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28244227_28246218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28244227 - 28246218

Intron Length:

1992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGCAT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATGTACTTACTG

Flanking Amino Acid:

EGVIYATITMDGEAVSSSYE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

62.2

43.8

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

72.8

0.51

1.1

76.4

36.7

Minor 5ss

38.1

-1.3

3.3

47.2

48.2

Minor BPS

51.1

-0.1

1.9

58.46

43.6

Associated Gene:

Gene:

AFAP1L2

Ensembl Gene ID:

ENSAPLG00000012051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012585

28234325 - 28247219

12895