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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28507022_28514111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28507022 - 28514111

Intron Length:

7090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

CTTTCCCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTATTACTAACT

Flanking Amino Acid:

TSILQHAVEALAPSLPLQED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.3

46.2

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

74.9

0.56

0.7

69.5

24.5

Minor 5ss

31.6

-2.1

3.3

40.9

44.9

Minor BPS

59.5

0.38

1.9

82.84

37.6

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917