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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28514191_28516047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28514191 - 28516047

Intron Length:

1857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCATTCTTAATT

Flanking Amino Acid:

AITHYYIETSDDKAPVTDTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.1

0.63

0.8

77.5

30.2

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

78.1

0.96

1.1

84.08

37.1

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917