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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28516218_28518434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28516218 - 28518434

Intron Length:

2217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGTACT

5'SS Class:

major

3'SS Sequence:

ATGTTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTCTTTAGTG

Flanking Amino Acid:

ETLYTLGKADCPPGMKQQVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

77.4

37.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.1

0.68

77.4

41.2

Minor 5ss

39.4

-1.2

3.1

56.5

Minor BPS

69.8

0.48

1.6

74.98

37.7

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917