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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28518540_28518769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28518540 - 28518769

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTC

5'SS Class:

major

3'SS Sequence:

CTGTGTGTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CCTGCCTTAATT

Flanking Amino Acid:

PHINVHRPVQKLIRLCGEVL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

66.9

39.5

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

65.1

0.34

1.1

60.2

44.9

Minor 5ss

40.3

-1.1

3.5

45.8

Minor BPS

72.1

0.77

1.4

79.08

43.9

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917