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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28518893_28523112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28518893 - 28523112

Intron Length:

4220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AGCTTTATAATT

Flanking Amino Acid:

DPYLVNFFLENKLKALASKE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

70.6

0.46

62.6

43.1

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

52.9

0.17

1.6

67.14

38.2

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011792

28506676 - 28538592

31917