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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28524620_28525832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28524620 - 28525832

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATGCATTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATGCATT

Flanking Amino Acid:

DIETVEAINWGLDSYSHKED

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

68.3

0.41

0.9

59.2

42.1

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

-0

2.1

75.82

40.6

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917