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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28525948_28526052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28525948 - 28526052

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAAAT

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

CCATCCTGTATT

Flanking Amino Acid:

CDQLIKEAQKTAAVAMAKAV

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

74.5

35.1

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

37.6

-1.4

2.8

49.3

46.6

Minor BPS

49.8

0.07

1.8

65.17

45.6

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011792

28506676 - 28538592

31917

ENSAPLT00000029903

28506676 - 28538419

31744