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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28526422_28527676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28526422 - 28527676

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTCATGTAATT

Flanking Amino Acid:

IEHCDHISDEISIMTLRMFE

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.9

80.8

36.4

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

48.1

-0

2.1

70.98

40.2

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011792

28506676 - 28538592

31917

ENSAPLT00000029903

28506676 - 28538419

31744