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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28527847_28528717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28527847 - 28528717

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TATAATCTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TCTAATATAATC

Flanking Amino Acid:

VVENGQIAGAIDLEEDPLFT

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

0.72

78.4

31.2

Major PPT

72.8

0.51

0.9

65.4

40.4

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

48.3

-0.1

1.8

60.77

38.7

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917