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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28528862_28530446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28528862 - 28530446

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTAACA

Flanking Amino Acid:

GKTEVHKIVNSFLCLVPDEA

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.6

0.73

0.7

78.2

30.5

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

0.91

1.5

86.38

31.5

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917