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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28530538_28532271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28530538 - 28532271

Intron Length:

1734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TACTTTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTTCCTCACTA

Flanking Amino Acid:

DTYLRDAHRQFRDYCVICLR

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

71.6

40.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

83.6

0.76

0.8

77.1

36.8

Minor 5ss

35.3

-1.7

2.9

41.6

Minor BPS

65.1

0.47

1.8

79.52

37.1

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029903

28506676 - 28538419

31744

ENSAPLT00000011792

28506676 - 28538592

31917