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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28536943_28538112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28536943 - 28538112

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGTGTGCTGACG

Flanking Amino Acid:

CRSLFSVIVRVVGDLMVRIQ

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

79.2

0.66

0.9

72.8

37.5

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

41.3

-0.8

2.4

51.27

43.4

Associated Gene:

Gene:

FAM160B1

Ensembl Gene ID:

ENSAPLG00000011308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011792

28506676 - 28538592

31917

ENSAPLT00000029903

28506676 - 28538419

31744