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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28568674_28572675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28568674 - 28572675

Intron Length:

4002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGAAA

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TAGTTCTGAAGT

Flanking Amino Acid:

TLDSAATGVLVVGIGKGTKL

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

31.2

-2.1

3.1

31.3

42.6

Minor BPS

57.3

0.31

1.8

73.55

43.2

Associated Gene:

Gene:

TRUB1

Ensembl Gene ID:

ENSAPLG00000006808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034908

28566756 - 28596234

29479

ENSAPLT00000007072

28566756 - 28598141

31386