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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28587246_28591992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28587246 - 28591992

Intron Length:

4747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCATA

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTTCTTTCTACA

Flanking Amino Acid:

TGKVTEEKPYDQVTKRDLEN

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

72.6

38.3

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

92.3

0.95

0.6

87.9

22.3

Minor 5ss

43.2

-0.7

2.9

54.6

43.8

Minor BPS

49.7

-0

1.8

68.48

37.5

Associated Gene:

Gene:

TRUB1

Ensembl Gene ID:

ENSAPLG00000006808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034908

28566756 - 28596234

29479

ENSAPLT00000007072

28566756 - 28598141

31386