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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28592066_28593324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28592066 - 28593324

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

TCTATCTGATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTATCTGATCA

Flanking Amino Acid:

FTGDIMQVPPLYSALKKDGE

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.2

36.4

Major BPS

100

1.24

0.5

100

Major PPT

70.6

0.46

70.3

39.9

Minor 5ss

44.4

-0.6

2.8

40.1

Minor BPS

50.4

0.01

1.8

64.49

41.9

Associated Gene:

Gene:

TRUB1

Ensembl Gene ID:

ENSAPLG00000006808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034908

28566756 - 28596234

29479

ENSAPLT00000007072

28566756 - 28598141

31386