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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28593465_28594594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28593465 - 28594594

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

ATTAACATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCACTATTAACA

Flanking Amino Acid:

QQFQPPLFTLDVECGGGFYV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.4

Major BPS

81.9

0.79

0.8

81.9

Major PPT

71.1

0.47

Minor 5ss

-2.3

3.5

41.8

Minor BPS

58.7

0.27

1.6

66.68

39.3

Associated Gene:

Gene:

TRUB1

Ensembl Gene ID:

ENSAPLG00000006808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034908

28566756 - 28596234

29479

ENSAPLT00000007072

28566756 - 28598141

31386