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Intron Name: Anas_platyrhynchos_platyrhynchos_6_286263_287783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

286263 - 287783

Intron Length:

1521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTGTCTTACAG

Flanking Amino Acid:

VKCQKWRYSQLSLLSIIKSC

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

89.8

0.9

0.7

84.2

30.9

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

52.6

-0

1.9

63.72

44.3

Associated Gene:

Gene:

RNLS

Ensembl Gene ID:

ENSAPLG00000015666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019703

215255 - 288812

73558