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Intron Name: Anas_platyrhynchos_platyrhynchos_6_28986297_29015551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28986297 - 29015551

Intron Length:

29255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

TTTTCCCCATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTGTTAAAA

Flanking Amino Acid:

ESAEHPKTIQQLMRERQQMA

Intron Amino Acid Position:

1298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.2

0.68

0.8

79.4

27.8

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

57.1

0.22

2.1

72.99

38.7

Associated Gene:

Gene:

ATRNL1

Ensembl Gene ID:

ENSAPLG00000006869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046926

28652795 - 29144602

491808

ENSAPLT00000042540

28653737 - 29017416

363680