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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29015660_29017383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29015660 - 29017383

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TATTCTGTAAGA

Flanking Amino Acid:

QTDFLRGPLEVFSEFAKEGH

Intron Amino Acid Position:

1334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

87.6

0.85

0.8

80.3

37.3

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

53.9

0.12

2.3

71.96

40.5

Associated Gene:

Gene:

ATRNL1

Ensembl Gene ID:

ENSAPLG00000006869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042540

28653737 - 29017416

363680