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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29202965_29205054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29202965 - 29205054

Intron Length:

2090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TAATGGTGACCA

Flanking Amino Acid:

SVDTELCLNENAIGKDNTAG

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

85.6

0.8

80.6

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

39.6

-0.7

2.5

54.15

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826

ENSAPLT00000008008

29201892 - 29351494

149603