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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29205112_29227940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29205112 - 29227940

Intron Length:

22829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CATTTGTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAATTTTGCATT

Flanking Amino Acid:

NDSPACANLQAQKKRKSNES

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

65.7

0.39

71.3

30.3

Major PPT

0.54

0.9

69.1

36.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

45.3

-0.2

1.8

60.59

37.3

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826

ENSAPLT00000008008

29201892 - 29351494

149603