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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29228120_29230888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29228120 - 29230888

Intron Length:

2769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

LNFFQDNTCLKNAIQAFGNG

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

73.3

37.3

Major BPS

65.3

0.38

71.6

30.1

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

35.8

-1.6

2.9

44.1

38.5

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826

ENSAPLT00000008008

29201892 - 29351494

149603