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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29231024_29236232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29231024 - 29236232

Intron Length:

5209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

DCLLAYSGLIGTVMTPNYID

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826

ENSAPLT00000008008

29201892 - 29351494

149603